SubsetMask
SubsetMask is a lightweight toolkit designed to help researchers subset Spatially Resolved Transcriptomics (SRT) data objects—such as those from CosMx and Xenium platforms. It can be applied to any transcriptomics dataset that includes spatial coordinate metadata (x, y), making it broadly useful across SRT technologies.
Installation
To install the latest development version from GitHub:
pip install git+https://github.com/RobinCarvajal/SubsetMask.git
TUTORIALS